ChemInfAligner

class ChemInfAligner

Bases: Aligner

Aligner for the Chemical Information Ontology.

Instantiate the aligner.

Attributes Summary

curation_header	Header to put on the curation table, corresponding to get_curation_row()
key	The key for the external registry

Methods Summary

get_curation_row(external_id, external_entry)	Prepare curation rows for unaligned CHEMINF registry entries.
getter()	Get the Chemical Information Ontology registry.

Attributes Documentation

curation_header: ClassVar[Sequence[str]] = ('name', 'description')

Header to put on the curation table, corresponding to get_curation_row()

key: ClassVar[str] = 'cheminf'

The key for the external registry

Methods Documentation

get_curation_row(external_id, external_entry)

Prepare curation rows for unaligned CHEMINF registry entries.

Return type

Sequence[str]

getter()

Get the Chemical Information Ontology registry.