OntobeeAligner

class OntobeeAligner(force_download: bool | None = None)

Bases: Aligner

Aligner for OntoBee xref registry.

Instantiate the aligner.

Attributes Summary

curation_header	Header to put on the curation table, corresponding to get_curation_row()
key	The key for the external registry

Methods Summary

get_curation_row(external_id, external_entry)	Return the relevant fields from an OntoBee entry for pretty-printing.
getter()	Get the OntoBee registry.

Attributes Documentation

curation_header: ClassVar[Sequence[str]] = ('name', 'url')

Header to put on the curation table, corresponding to get_curation_row()

key: ClassVar[str] = 'ontobee'

The key for the external registry

Methods Documentation

get_curation_row(external_id, external_entry) → Sequence[str]

Return the relevant fields from an OntoBee entry for pretty-printing.

getter()

Get the OntoBee registry.