# -*- coding: utf-8 -*-
"""Align FAIRsharing with the Bioregistry."""
from typing import Sequence
from bioregistry.align.utils import Aligner
from bioregistry.external.fairsharing import get_fairsharing
__all__ = [
"FairsharingAligner",
]
[docs]class FairsharingAligner(Aligner):
"""Aligner for the FAIRsharing."""
key = "fairsharing"
alt_key_match = "abbreviation"
skip_deprecated = True
getter = get_fairsharing
curation_header = ("abbreviation", "name", "description")
[docs] def get_curation_row(self, external_id, external_entry) -> Sequence[str]:
"""Prepare curation rows for unaligned BioPortal registry entries."""
return [
external_entry["name"],
external_entry["abbreviation"],
external_entry["description"],
]
if __name__ == "__main__":
FairsharingAligner.align()