get_bioregistry_iri

get_bioregistry_iri(prefix: str, identifier: str) → str | None[source]

Get the bioregistry link.

Parameters:

prefix – The prefix in the CURIE
identifier – The identifier in the CURIE

Returns:

A link to the bioregistry resolver

>>> get_bioregistry_iri("pdb", "1234")
'https://bioregistry.io/pdb:1234'

Redundant prefix (OBO)

>>> get_bioregistry_iri("go", "GO:0120212")
'https://bioregistry.io/go:0120212'
>>> get_bioregistry_iri("go", "go:0120212")
'https://bioregistry.io/go:0120212'
>>> get_bioregistry_iri("go", "0120212")
'https://bioregistry.io/go:0120212'

Redundant prefix (banana; OBO)

>>> get_bioregistry_iri("fbbt", "fbbt:00007294")
'https://bioregistry.io/fbbt:00007294'
>>> get_bioregistry_iri("fbbt", "fbbt:00007294")
'https://bioregistry.io/fbbt:00007294'
>>> get_bioregistry_iri("fbbt", "00007294")
'https://bioregistry.io/fbbt:00007294'

Redundant prefix (banana; explicit)

>>> get_bioregistry_iri("go.ref", "GO_REF:1234")
'https://bioregistry.io/go.ref:1234'
>>> get_bioregistry_iri("go.ref", "1234")
'https://bioregistry.io/go.ref:1234'