ChemInfAligner

class ChemInfAligner(force_download=None)[source]

Bases: Aligner

Aligner for the Chemical Information Ontology.

Instantiate the aligner.

Attributes Summary

curation_header

Header to put on the curation table, corresponding to get_curation_row()

key

The key for the external registry

Methods Summary

get_skip()

Get the skipped identifiers.

getter()

Get the Chemical Information Ontology registry.

Attributes Documentation

curation_header: ClassVar[Sequence[str]] = ('name', 'description')

Header to put on the curation table, corresponding to get_curation_row()

key: ClassVar[str] = 'cheminf'

The key for the external registry

Methods Documentation

get_skip()[source]

Get the skipped identifiers.

Return type

Mapping[str, str]

getter()

Get the Chemical Information Ontology registry.