Alignment¶
bioregistry.align Package¶
Workflows for aligning external registries.
Classes¶
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A class for aligning new registries. |
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Aligner for AberOWL. |
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Aligner for BioContext. |
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Aligner for Biolink. |
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Aligner for BioPortal. |
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Aligner for CropOCT. |
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Aligner for EcoPortal. |
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Aligner for AgroPortal. |
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Aligner for the Cellosaurus. |
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Aligner for the Chemical Information Ontology. |
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Aligner for the FAIRsharing. |
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An aligner for the Gene Ontology (GO) registry. |
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Aligner for the MIRIAM registry. |
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Aligner for the N2T. |
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Aligner for NCBI xref registry. |
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Aligner for the OBO Foundry. |
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Aligner for the OLS. |
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Aligner for OntoBee xref registry. |
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Aligner for Prefix Commons. |
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Aligner for UniProt. |
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Aligner for Wikidata properties. |
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Aligner for the EDAM ontology. |
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Aligner for the Registry of Research Data Repositoris (r3data). |
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Aligner for HL7 External Code Systems. |
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Aligner for BARTOC. |
bioregistry.external Package¶
Workflows for downloading and aligning various external registries.
Functions¶
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Get the BioContext context map. |
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Get Biolink. |
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Get the BioPortal registry. |
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Get the Cellosaurus registry. |
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Get the Chemical Information Ontology registry. |
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Get the FAIRsharing registry. |
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Get the GO registry. |
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Get the MIRIAM registry. |
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Get the N2T registry. |
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Get the NCBI data. |
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Get the OBO Foundry registry. |
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Get the OLS registry. |
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Get the OntoBee registry. |
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Get the Life Science Registry. |
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Get the UniProt registry. |
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Get the wikidata registry. |
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Get the EDAM registry. |
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Get the re3data registry. |
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Get HL7 OIDs. |
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Get the BARTOC registry. |