UniProtAligner
- class UniProtAligner(force_download: bool | None = None)[source]
Bases:
Aligner
Aligner for UniProt.
Instantiate the aligner.
Attributes Summary
Set this if there's another part of the data besides the ID that should be matched
Header to put on the curation table, corresponding to
get_curation_row()
The key for the external registry
Methods Summary
getter
()Get the UniProt registry.
Attributes Documentation
- alt_key_match: ClassVar[str | None] = 'abbreviation'
Set this if there’s another part of the data besides the ID that should be matched
- curation_header: ClassVar[Sequence[str]] = ('abbreviation', 'name', 'uri_format', 'category')
Header to put on the curation table, corresponding to
get_curation_row()
Methods Documentation